079 FXCA62 TJSJ 240839 AFDSJUArea Forecast Discussion National Weather Service San Juan PR 439 AM AST Wed Sep 24 2025
.KEY MESSAGES...
* A robust tropical wave (AL94) will cross the region today into Thursday, bringing periods of squally weather with bands of heavy showers, thunderstorms, and gusty winds.
* Elevated to significant flooding risks are anticipated from the heavy rainfall, with potential for urban and small stream flooding, flash flooding, rapid river rises, and landslides in steep terrain.
* Hazardous marine conditions are expected as AL94 moves across the region, with Small Craft Advisories in effect. Increasing winds and seas will create dangerous conditions for mariners.
* An extended wet period will continue into the weekend, as deep tropical moisture from AL94 and AL93, moving north of the area, sustains rounds of showers and thunderstorms.
* For the U.S. Virgin Islands: Squally weather will persist through Thursday with heavy showers, thunderstorms, gusty winds, and hazardous marine conditions. Additional rounds of showers are expected into the weekend, maintaining a risk of flooding in vulnerable areas before gradual improvement by midweek of next week.
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.SHORT TERM...Today through Friday...
Tranquil conditions prevailed overnight across the region, with only brief passing showers affecting eastern Puerto Rico and the US Virgin Islands under light northeasterly winds that gradually transitioned to more east to southeasterly. A few stronger showers with isolated thunderstorms developed over the surrounding waters, occasionally producing lightning south of Saint Croix and northwest of Aguadilla, though no products were required. Overnight lows ranged from the upper 70s to the low 80s in coastal and urban areas, while interior valleys and higher terrain cooled to the upper 60s to mids, slightly warmer than the previous nights.
Unlike the last several days, heat will not be the main hazard today. Instead, attention shifts to a flooding threat as a tropical wave currently monitored by the National Hurricane Center steadily approaches our region. Winds will gradually veer to the south, favoring enhanced moisture transport and heavier rainfall along the eastern and northern portions of Puerto Rico and the US Virgin Islands. Model guidance shows above-normal precipitable water values for this time of year, with mid-level temperatures near -7 degrees C, both of which support deep convective development.
By late today into Thursday, interaction between the tropical wave and an upper-level low will maximize instability and rainfall potential. The most widespread and intense activity is expected during this window, initially impacting the Virgin Islands before spreading across Puerto Rico. Therefore, periods of squally weather, heavy rainfall, and thunderstorms will bring the potential for significant impacts, including rainfall totals of 2 to 6 inches, along the northern and eastern half of PR and the US Virgin Islands. The unsettled and unstable weather pattern will likely persist through the end of the workweek. However, showers and thunderstorms are expected to be less widespread after Thursday.
Given already saturated soils across the northern and western half of Puerto Rico, as well as St. Thomas and western St. Croix, risks include urban and small stream flooding, flash flooding, rapid river rises, coastal water surges, and landslides in steep terrain.
Residents and visitors should remain alert for any changes in the forecast, in order to make informed decisions. For further details, refer to the hydrology section.
.LONG TERM...Saturday through Wednesday...
For this weekend, soils across the region will likely remain saturated and streamflows elevated after several days of heavy rainfall. These antecedent conditions increase the areas sensitivity to additional rainfall, meaning even moderate showers could quickly trigger urban and small stream flooding, as well as isolated landslides in steep terrain.
This weekend, little change is expected in the overall pattern suggested by previous model cycles. A deep-layer southerly flow, reinforced by the northward movement of Invest AL94 and AL93, will continue transporting abundant tropical moisture into the region. Precipitable water values will remain above normal, generally at or above 2 inches, maintaining a moist and unstable environment. In combination with daytime heating and sea breeze convergence, this will favor frequent rounds of showers and thunderstorms, particularly during the afternoon. Activity will tend to focus on southern and eastern Puerto Rico and the smaller islands overnight and during the morning, then shift toward the interior and northwestern municipalities in the afternoon. The prevailing southerly flow will also enhance rainfall potential along the northern slopes of Puerto Rico.
The ECMWF Extreme Forecast Index now signals the potential for extreme precipitation, especially across the southern and eastern portions of the forecast area, although ensemble spread maintains some uncertainty regarding the exact magnitude and focus. Regardless, given antecedent soil conditions, the potential for flooding impacts will remain elevated through the weekend and into early next week.
Conditions are expected to gradually improve beginning Tuesday as the moisture plumes shift north and precipitable water values drop to near or slightly below seasonal levels, around 1.5 to 1.6 inches. With this drying trend, shower and thunderstorm activity will become more isolated, and the flood threat should begin to diminish compared to the weekend. Still, isolated afternoon convection will remain possible, especially across the western and interior portions of Puerto Rico.
In addition to rainfall hazards, a persistent southerly flow will maintain above-normal temperatures and oppressive heat indices across coastal and urban areas. Extreme Heat Warnings or Advisories are likely to be needed through much of the period, particularly over the weekend when moisture levels and heat combine to create dangerous conditions.
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.AVIATION... (06Z TAFs)
All TAF sites should experience VFR conditions. However, after 24/14Z, -SHRA/VCTS could affect TIST, TISX, and TJSJ. But after 24/17Z, TSRA should prompt periods of MVFR conditions across most TAF sites, with the heaviest TS activity as the vigorous Tropical Wave being monitored by the National Hurricane Center moves closer to the region. Winds will remain from the E-SE and gradually become more S from 24/15-24/22Z at 815 kts and higher gusts near the heaviest RA and TS associated to the tropical wave.
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.MARINE...
Today, a vigorous tropical wave will move into the islands, increasing the potential for thunderstorms and leading to localized hazardous marine conditions. These storms may produce frequent lightning over exposed waters. In addition, an increase in surface winds is forecast through at least late tonight, particularly across the offshore Atlantic waters, Anegada Passage and waters east of Puerto Rico, around Vieques, Culebra, and St. Thomas, where Small Craft Advisories are in effect. Seas up to 7 feet, particularly across the offshore Atlantic waters and Anegada Passage.
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.BEACH FORECAST...
Increasing winds and choppy seas as AL94 crosses the region will maintain hazardous conditions, particularly along the Atlantic- facing beaches. As a result, a moderate rip current risk will persist across the northern and eastern beaches of Puerto Rico, Vieques, Culebra, and the U.S. Virgin Islands. Beachgoers are urged to exercise caution and avoid swimming in high-risk areas.
In addition, thunderstorms associated with AL94 will pose significant hazards at the coast. Frequent lightning strikes, gusty winds, and heavy rainfall may lead to dangerous conditions, including sudden reductions in visibility and localized flooding near the shoreline. Remember: if thunder roars, go indoors. Swimmers and boaters should immediately seek shelter when storms approach.
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.HYDROLOGY...
.PREV DISCUSSION... /issued 315 PM AST Tue Sep 23 2025/
Unsettled weather conditions are expected to persist through much of the workweek, leading to an elevated flooding threat for both Puerto Rico and the US Virgin Islands.
The main threats for Puerto Rico are Urban and isolated flash flooding, landslides, river surges, and some rivers potentially reaching flood stage. Rainfall accumulations for the event are expected to range from 4 to 6 inches across the eastern third of PR, including Vieques and Culebra, and the northwest quadrant, particularly on Wednesday and Thursday. The best chance for the flooding threat will be Wednesday through Thursday, when more vigorous tropical wave activity and an upper-level low will increase rainfall and thunderstorm coverage.
The primary threats to the US Virgin Islands include water surges along drain gutters, squally weather with gusty winds, ponding of water on roads/low-lying areas, urban and isolated flash flooding, and possible landslides. Expect rainfall amounts of around 2 to 4 inches, with isolated higher amounts of up to 6 inches. The best chance of flooding is between Wednesday and Thursday, with stronger showers and thunderstorms.
Thus, we encourage residents and visitors to actively monitor NWS flood watches and warnings, as additional rainfall on already saturated soils will heighten vulnerability to flash flooding and landslides. For further details, see the Hydrologic Outlook (ESFSJU) issued by WFO-San Juan.
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.SJU WATCHES/WARNINGS/ADVISORIES... PR...None. VI...None. AM...Small Craft Advisory until 6 AM AST Thursday for AMZ711.
Small Craft Advisory until 6 PM AST this evening for AMZ716-723- 726.
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SHORT TERM/AVIATION...MMC LONG TERM/MARINE/BEACH FORECAST...CVB HYDRO...ERG
NWS SJU Office Area Forecast Discussion